forNMA

A tool for automated single cell phenotypical profiling

forNMA

forNMA pipeline guide

forNMA's pipeline combines automated nuclear segmentation, morphometric profiling, multiplexed fluorescence quantification, nuclear foci detection and colocalization, nucleus-to-cytoplasmic intensity measurements, dimensionality reduction, and long-term cell tracking. To maximize accessibility, forNMA can be used through an intuitive graphical user interface.

forNMA

forNMA results for Nuclear Morphometric Analysis (NMA)

forNMA

forNMA results for single cell tracking!

forNMA also provides native integration with Napari-TRACE for single cell tracking over time. This enables the precise study of dynamic phenotypes and herdability of cell states presented by forNMA's multiple features analysis.

USAGE

To use the toolcontact us!

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Cell Signaling and Cellular Plasticity Laboratory — Instituto de Biociências, UFRGS.

Related Links

Programa de Pós-Graduação em Biologia Celular e Molecular — UFRGS

Centro de Biotecnologia — UFRGS

Universidade Federal do Rio Grande do Sul

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Instituto Biociências - Dep. Biofísica

Prédio 43431, Sala 115

Avenida Bento Gonçalves, 9500 — Bloco IV

Porto Alegre, 91509-900, Brazil


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