Software and bench resources built in the lab, free for academic use. Grouped by what you are trying to do.
Wet-lab procedures and the reagents behind them, written down so a result can be repeated by someone who was not in the room.
1 tool
Turning microscopy into numbers: segmenting nuclei, following single cells across frames and quantifying what changed.
5 tools
Simulating populations and mining single-cell data: oncogenome evolution, clonal lineages, fitness dynamics and outliers.
4 tools
Each tool ships with its own instructions and citation. If you publish using one of them, cite the paper listed on that tool page.
Programa de Pós-Graduação em Biologia Celular e Molecular — UFRGS
Instituto Biociências - Dep. Biofísica
Prédio 43431, Sala 115
Avenida Bento Gonçalves, 9500 — Bloco IV
Porto Alegre, 91509-900, Brazil
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Porto Alegre · Brazil